methylDackel extract segmentation fault

[acontrerasg]

Hello,

I am trying to use the MethylDackel extract command with the default syntax: MethylDackel extract ref.fa sorted_alignmnet.bam but I get a somewhat cryptic error: Segmentation fault

However, with the same setup both mbias and perRead commands works.

Any ideas what can i do to fix it?

Thanks for your time!

[Blosberg]

I'm encountering the same problem, but I think it's the same as issue #99 , so it might make things easier to keep the conversation in one place and look for updates there.