deep-rules icon indicating copy to clipboard operation
deep-rules copied to clipboard

Ten Quick Tips for Deep Learning in Biology

Results 65 deep-rules issues
Sort by recently updated
recently updated
newest added

This is to discuss outstanding issues for Tip 6: Tune your hyperparameters extensively and systematically. https://github.com/Benjamin-Lee/deep-rules/blob/master/content/08.hyperparameters.md

This is to discuss outstanding issues for Tip 9: Don’t over-interpret predictions. https://github.com/Benjamin-Lee/deep-rules/blob/master/content/11.interpretation.md

This is to discuss outstanding issues for Tip 5: Choose an appropriate data representation and neural network architecture. https://github.com/Benjamin-Lee/deep-rules/blob/master/content/07.architecture-and-representation.md

This is to discuss outstanding issues for Tip 3: Understand the complexities of training deep neural networks https://github.com/Benjamin-Lee/deep-rules/blob/master/content/05.dl-complexities.md

https://arxiv.org/abs/1906.01998 > Despite the widespread usage of machine learning throughout organizations, there are some key principles that are commonly missed. In particular: 1) There are at least four main families...

paper

I would merge #196 but I do not know whether merge commit, squash and merge, or rebase and merge are preferred. Please specify in `CONTRIBUTING.md`.

meta

This commentary covers some pitfalls of deep learning in biology and calls for better benchmarking > Machine learning is a branch of artificial intelligence (AI) involving computer programs that are...

paper

**Have you checked the [list of proposed tips](https://github.com/Benjamin-Lee/deep-rules/issues?q=is%3Aissue+is%3Aopen+label%3Atip) to see if the tip has already been proposed?** - [x ] Yes **Did you add yourself as a [contributor](https://github.com/Benjamin-Lee/deep-rules/blob/master/contributors.md) by making...

I'm happy to do this myself but would prefer to delegate if at all possible. Looking at the [commit graph](https://github.com/Benjamin-Lee/deep-rules/graphs/contributors?from=2018-09-29&to=2020-06-04&type=c), it seems this project slowed down about a year ago....

To keep the scope of this article focused, the tips should be about deep learning in biology. Several tips only pertain to one or the other. I recommend we add...