OpenABM-Covid19
OpenABM-Covid19 copied to clipboard
BDI-pathogens
OpenABM-Covid19: an agent-based model for modelling the spread of SARS-CoV-2 (coronavirus) and control interventions for the Covid-19 epidemic
Bumps [numpy](https://github.com/numpy/numpy) from 1.18.2 to 1.22.0. Release notes Sourced from numpy's releases. v1.22.0 NumPy 1.22.0 Release Notes NumPy 1.22.0 is a big release featuring the work of 153 contributors spread...
![dependabot[bot] avatar](https://avatars.githubusercontent.com/in/29110?v=4 "dependabot[bot] avatar"){kind=avatar}
PR for discussion and visibility in the group. Some formatting and style changes may be required. Please do let me know. (Note: Although the feature name is 'armadillo', this change...
Currently on creation all the disease and infection parameters can be set via the R and Python interfaces. However, they are not displayed on the object once created.
Simply give individuals coordinates which can be assigned and reported. Intended to allow intervention, and interaction, modelling as functions of distance between agents. Passes tests, and added `test_spatial.py` to verify...
Bumps [py](https://github.com/pytest-dev/py) from 1.8.1 to 1.10.0. Changelog Sourced from py's changelog. 1.10.0 (2020-12-12) Fix a regular expression DoS vulnerability in the py.path.svnwc SVN blame functionality (CVE-2020-29651) Update vendored apipkg: 1.4...
Includes base code to test on symptoms and tracing, as well as a number of related parameters. *Note that the specific parameters (g/b) are currently untuned and not ready for...
The R interface and Python interface should be kept is synch with each other with new features being added to both. The CONTRIBUTING.Md suggestions should be updated to reflect this...
With fraction hospitalised set to zero in all age groups but testing on symptoms and on trace, one would expect `n_tests` to be non-zero but it is zero in this...
The `n_tests` column of the time series records zero tests if hospitalisation fraction is zero in all age groups (total infected added as a superfluous variable in case `--showlocals` is...
The trace token file does not have a dictionary explaining the columns.
Metadata
Owner
Metadata
OpenABM-Covid19: an agent-based model for modelling the spread of SARS-CoV-2 (coronavirus) and control interventions for the Covid-19 epidemic