OpenABM-Covid19

OpenABM-Covid19 copied to clipboard

Fix minor inconsistencies in the names of the output columns in time series files. The following is the suggested changes to include in the next release. Suggested updated defintions for...

p-robot

Tests running the C executable

1

A lot of tests still run by using the compiled C executable covid19ibm.exe. In #10 I added a new function in C so that the parameters can be passed using...

ghost

As the application evolves the parameters change, in 2 ways: 1. The set of parameter names changes, mostly by growing. 2. The best estimated values for the parameters change based...

RossBoylan

Currently there are a few implementations of counters. We should merge them on to a single counter structure.

roberthinch

Having output of testing events would be of interest to look at age-stratified statistics on testing coverage etc. In the most general form, this would require a new file: rows...

p-robot

Just a holding place for an issue number in case any of the work I'm doing on Network Distribution/randomness needs to be contributed back to the main project.

adamfowleruk

There is a deprecation warning when compiling OpenABM currently:- > DEPRECATION: covid19 is being installed using the legacy 'setup.py install' method, because it does not have a 'pyproject.toml' and the...

adamfowleruk

Moved to Python 3.8.17 minimum Tests pass against 3.8, 3.9, 3.10 Dockerfile updated to allow python version to be injected requirements.txt updated for current versions of libraries on python 3.8.17...

adamfowleruk

I've created a documentation website we could host on GitHub Pages. It uses mkdocs which I've themed based on the PSI website theme and layout. Also includes a GitHub Action...

adamfowleruk

More cases than infections

1

In a simulation results I get more total_case than total_infected. How is that possible? Is this due to false positive tests? If so, how can I identify the true cases...

kirchnergo