Axolotl233
Axolotl233
Hi, is there any advice?
@hardingnj thank you for your advice, i will do some simulate to investigate it.
Hi, Is there any progress? I have the same question. Best
Hello, As you said, I think --primary don't change any assembly files and just created hifiasm outputs of primary assembly (chimeric seqences created by different haplotype assembly) and alternative assembly...
I have tried to increase vaule of parameter D, a and r, the result are improved but still not completed in this region, could you have any progress about this...
Thank you, I have mailed my data file to you ([email protected]), please check it
hi Haoyu, Could you kindly let me now if there have any progress?
Hi, Thank you for your reply, this software is truly a powerful toolbox. I will try the protocol you mentioned, but I am not sure if I understood the details...
> Have you tried using `--n-hap 4` ? I have tried but this option is not suitable in my case. If you use `--n-hap 4`, hifiasm will introduce unexpected mistakes....