AnunayS

fasta file upload error

5

I tried several commands after the reference file path in the resquiggle command but every time it is showing the following error.  However the minimap2 is working fine. I...

resquiggle command problem

1

the command I am giving is as follows: $ tombo resquiggle /tombotest/fast5/ \ /tombotest/fast5/msmeg.fasta/ \ --processes 4 --num-most-common-errors 5 It is showing unrecognised arguements: --processes 4 Also can anyone explain...

The entire processes are run when running through docker profile. But somehow the pipeline is not performing Deseq2 and Dexseq analysis. I tried all the possible combinations from the protocol...