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resquiggle command problem

Open AnunayS opened this issue 3 years ago • 1 comments

the command I am giving is as follows:

$ tombo resquiggle /tombotest/fast5/ \ /tombotest/fast5/msmeg.fasta/ \ --processes 4 --num-most-common-errors 5

It is showing unrecognised arguements: --processes 4

Also can anyone explain what does 4 and 5 means in the above command. Also if they can be changed.

Thankyou.

AnunayS avatar Jun 05 '21 12:06 AnunayS

Try removing the backslashes. Run tombo resquiggle --help for a summary of what each option does. All the options can be changed.

SycamoreLeaf avatar Jun 08 '21 14:06 SycamoreLeaf