Anna Schaar

bug fix: hue in sc.pl.violin

5

closses #1174 hue key is now added to keys if hue is in kwds. before obs_tidy did not include this keyword, so this resulted in an ValueError an alternative would...

Refactor base estimator class and dataloader instance: - [ ] move adjacency calculation - [ ] move robustness augmentations - [ ] move simulation

https://genomebiology.biomedcentral.com/articles/10.1186/s13059-023-03045-1

Preprocessing enhancements

2

- [ ] add DecontX tutorial - [ ] add more details for visualization "This is generally where I'd like to see a few comments on limitations of embeddings and...

Spatial omics content

1

- [x] Introduction - scope 0.5-1 page - look into reviews - broad overview into the field - mention nature methods "method of the year 2020" - define axis: targeted/high-resolution...