AnaAzambuja

Error determining peaks for anchor inference

2

Hi, I am trying to run hichipper in python 2.7 and I getting the error bellow. All R dependencies were re-installed. Any idea of what might be happening? Thanks, Ana...

Error determining peaks for anchor inference

3

Hi, Running hichipper I got the following error: Error: The requested file (hichipper_output_D3_r1/allSamples_temporary_hichipperPeaks.bed_pad.bed.tmprf.tmp) could not be opened. Error message: (No such file or directory). Exiting! Any idea of what i...

hichipper into .hic file

1

Hi, I am using hichipper and diffloop to analyse my H3K27Ac HiChip data. Is that a way to convert hichipper output into .hic file for JuiceBox visualization? Thanks, Ana

no mango file

7

Hi, I've being using hichipper in my hichip data set but although the log file indicates the generation of the mango file, I cannot find it in the output folder....