AmelZulji

Unexpected plot size with design formula

1

Hi folks, Following code: ``` library(ggplot2) library(patchwork) p1

relative path of Rmd file created by wflow_open is not valid

5

Hi there, I have realized that when I create notebook with `wflow_open`, relative paths in the notebook are not valid: `read_csv(file = "../data/mtcars.csv")` Error: '../data/mtcars.csv' does not exist in current...

RunFastMNN() with SCT assay

10

Hi folks, I am getting following error when running `RunFastMNN()` on samples normalized with SCT: ``` Computing 2000 integration features Error in SummarizedExperiment::SummarizedExperiment(assays = assays) : the rownames and colnames...

using full plot area

1

Dear @yanlinlin82, Thank you for the package! I have a minor question regarding the plot size. Namely, if you try to align couple of plots using i.e. patchwork it seems...

sorry for the basic question, I am new to atom. I am able to invoke path autocomplete box with `ctrl+space`, however if type a bash function before it doesnt work....

Advice about a dataset with conditions

4

hi @joschif, congrats on the publication and thank you for porting the analysis in a package! I would like to ask for an advice for analyzing a 10x multiome dataset...

LD_LIBRARY_PATH is not properly exported

5

**Describe the bug** Attaching R doesn't properly sets `LD_LIBRARY_PATH` (it leads to errors when loading libraries). When I lunch R from system (the same one which I specify in `r.path`...

hi There, I am wondering whether it is possible to use support for R which is available as module on red hat server on which I do not have root...