Alex Fletcher

PerMedCoE community benchmarking simulations

23

We should code up as many of the PerMedCoE community benchmarking simulations as possible in Chaste, and make sure that the code is running as quickly as it can (e.g....

Test archiving of Edge through vertex mesh rather than in TestEdge

1

This issue is a follow-up to the merge of Aydar's edge-related code into `develop` (see https://github.com/Chaste/Chaste/pull/8). The task is to look into a new way to test `Edge` archiving through...

Enable writing of CellVecData items to VTK

5

At present, we can get and set `CellVecData` items in each cell in a cell-based simulation. However, by default these items are not writing to VTK, unlike `CellData` items (see...

Create user tutorial for cell-based simulation command line arguments and parameter sweeping

10

See https://github.com/Chaste/trac_archive/blob/6a7d720d0f6351f9b0d2c7b9b3464f4f265cfa41/attachment/ticket/2762/ExampleCellBasedExecutable.cpp, old tickets #2601 and #2762, and old wiki pages for inspiration; see also Boost program options and `CommandLineArguments`. See also work done by @twinkarma as part of a...

Arrange September hackathon

2

Will this be in Oxford or Nottingham? Will it be on 17th September? What shall we do in it?