Alejandra Escobar

Taxonomic ranks are inverted

11

Hello there! I've been testing the VIRify v2.0 and I realised that the taxonomic annotation on the GFF file has the ranks inverted. For instance: taxonomy=Entomopoxvirinae;Poxviridae;Chitovirales Should be: taxonomy=Chitovirales;Poxviridae;Entomopoxvirinae And...

[BUG] Error in find_attc_max function

4

Hello there, Thank you for developing IntegronFinder. I am updating to version 2.0.3 to check if some issues related to negative coordinates and other bugs we have been experimenting with...

This module was developed to download and process the CDD databases necessary to run rpsblast from the FTP site of the NCBI. ## PR checklist - [X] This comment contains...

rpsblast module and test

1

# nf-core/modules pull request This is a brand new module for rpsblast, a BLAST application that searches a protein query against the conserved domain database (CDD). ## PR checklist Reported...

### Is there an existing module for this? - [x] I have searched for the existing module ### Is there an open PR for this? - [x] I have searched...