Agustin Pardo
Agustin Pardo
Hello, I am compiling a python little app. This app imports PyQt5 modules. The modules are: ```python from PyQt5.QtWidgets import QApplication, QWidget, QPushButton, QLabel, QGridLayout, QTextEdit, QLineEdit from PyQt5.QtCore import...
Hello, I am trying to use "singleGeneDeletion" function but i have some problems with no results. This is my model:  Then I run: [grRatio, grRateKO, grRateWT,...
Hello, I am trying to run "fastFVA" function of cobraToolBox using Matlab R2018b on Linux 18. This is the model I am using: http://bigg.ucsd.edu/models/iEK1008. I run this: `[v11, v12] =...
*Please include a short description of problem here* hello, I am using a model that is in m7H10 medium: The "model.medium" I is: {'EX_ca2': 1000.0, 'EX_cit': 1.0, 'EX_cl': 1000.0, 'EX_co2':...
*Please include a short description of problem here* Is there a way to use the "readCbMap" function with a ".json" format instead of ".txt" format? **I hereby confirm that I...
*Please include a short description of problem here* Hello, I am running FBA using a mycobacterium tuberculosis model from BIGG (http://bigg.ucsd.edu/models/iEK1008). After run FBA I using the e.coli map of...
*Please include a short description of problem here* Hello, I am using a COBRA model (.mat) from Palsson 2018 (https://bmcsystbiol.biomedcentral.com/articles/10.1186/s12918-018-0557-y), also it is in the BIGG database in .json format,...
Hello, How could use the memote diff function but in python with "json" format models? Regards
Hello, I run: ``` memote report snapshot --filename "report.html" iEK1008.xml ``` I get this: ``` /home/agustin/.local/lib/python3.6/site-packages/optlang/glpk_interface.py:688: KeyboardInterrupt (to show a full traceback on KeyboardInterrupt use --full-trace) ================================ 55 failed, 43...
Hi, Is possible to use a ".json" format model with memote? I run: ``` memote report snapshot --filename "report.html" iEK1011_m7H10_media.json ``` I get this: ``` critical: The model could not...