AfterDream

Results 4 issues of AfterDream

I install radian with conda (version = 4.13), but fail to open it, and the error information is: Traceback (most recent call last): File "/home/shpc_100539/miniconda3/bin/radian", line 10, in sys.exit(main()) File...

All the pep files are result of Transdecoder, then I clean the id of the sequence. But when I run the script, all the files of SigleGene are empty files....

### Setup I am reporting a problem with gseapy == 1.1.2, Python == 3.8.19, and operatingsystem == Ubuntu 20 My code as follows, the goal is to have gseapy complete...

During the analysis, two issues were encountered: An error code was displayed during the analysis `bedtools slop -i Result/Analysis/atac_pbmc_5k_nextgem/atac_pbmc_5k_nextgem_all_treat_pileup.bdg -g /home/bioinfo/miniconda3/envs/MAESTRO/lib/python3.8/site-packages/MAESTRO/annotations/GRCh38_chrom_len.txt -b 0 | /home/bioinfo/miniconda3/envs/MAESTRO/lib/python3.8/site-packages/MAESTRO/utils/bedClip stdin /home/bioinfo/miniconda3/envs/MAESTRO/lib/python3.8/site-packages/MAESTRO/annotations/GRCh38_chrom_len.txt Result/Analysis/atac_pbmc_5k_nextgem/atac_pbmc_5k_nextgem_sort.clip;sort -k1,1 -k2,2n...