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Published 20 hours ago • verified publisher icon dongwei1220

First step can not find the sequence of OG!

Open AfterDream opened this issue 5 years ago • 2 comments

All the pep files are result of Transdecoder, then I clean the id of the sequence. But when I run the script, all the files of SigleGene are empty files. Why the issue happened? Whether there is a specific format for the ID of the pep sequence?

AfterDream avatar Mar 09 '19 16:03 AfterDream

i have the same problem

zhangwenting0816 avatar Mar 30 '19 03:03 zhangwenting0816

i have the same problem

I solve it by cleaning the string of sequence id in the pep-file, you should add the species name (the name in the species-name.txt) to the head of sequence id eg. >Apple_sequence_id >Banana_sequence_id

AfterDream avatar Mar 30 '19 04:03 AfterDream