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RootPainter: Deep Learning Segmentation of Biological Images with Corrective Annotation

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My personal suggestion is to create a “results” folder within each project folder that contains a segmentation folder within it that perhaps also includes the model number in the folder...

Users should not have to think about how to create some kind of intermediary training dataset. They should just have to specify the dataset they want to eventually process (original...

https://github.com/Abe404/root_painter/discussions/117 https://github.com/Abe404/root_painter/compare/78eda63ccf589241b988bba20e68bccab2f96390..6c4f7c8c5d18905bc62455e74f1924029d27a50b

ready for release

The segment folder menu currently makes you select the input and output directories manually even though (as far as I can tell), it is sharply constrained by the program what...

Hi Abraham, Is there a way to install the server on a Mac using Apple Silicon (M1 Max) to take advantage of the GPU directly and not use Rozetta emulation?...

Opinion: 1. Get to the point faster in the MD. The benefit should be clear. Exemplify. 2. People run all sort of environments. Bash /Windows. Scripts help but are hard...

having to always click open-project -> find project file on the file system and then open it is quite tiring. I think it would be useful to have a list...

It's looking really bad, especially the dropdown menus/combo options. I need to figure out a better way to have the layout look good automatically.

If the data has not fully synced to the server and the user runs a segment folder command, then we could present a message to the user to tell them...

important

If there are errors with the segment folder command i.e some specific images are not processed, then this information should be presented to the user. It may be that specific...

important