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RootPainter: Deep Learning Segmentation of Biological Images with Corrective Annotation

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This also involves figuring out how to sign pyinstaller pyqt applications

The readme file in the painter folder

With rootpainter being able to call the dataset segmentation from the command line with a target, output and model specified would be great. This would help get round the issue...

As discussed in https://github.com/Abe404/root_painter/discussions/60#discussioncomment-4149722, the colab tutorial could be extended with a similar step-by-step guide including checking performance using the metrics plot, segmenting the original images, checking the composites and...

Rather than having to first open RootPainter and then open a project file, it should be possible to directly open a project file with RootPainter.

for users running the client on a computer with a sufficiently powerful GPU, there should be an option in the client to start a local server. This should not involve...

The tutorial linked here: https://github.com/Abe404/root_painter/blob/master/docs/cxr_lung_tutorial.md Is linked on the front page. But I think it is too difficult as it requires the user running python. It might not be easy...

**Describe the bug** export options not showing on metrics plot **To Reproduce** Steps to reproduce the behavior: 1. Go to show metrics 2. Right click on the metrics plot 3....

bug

When creating a dataset if setting the target size to 100, the size jumps back up to 900 immediately after clicking submit. There should instead be a warning saying a...

Version number is specified in 5 places: 1. https://github.com/Abe404/root_painter/blob/2825a12f1499b8f3c6f84438a90f7d22529c5f81/painter/src/main/python/about.py#L742 2. https://github.com/Abe404/root_painter/blob/2825a12f1499b8f3c6f84438a90f7d22529c5f81/painter/src/build/assets/Installer.nsi#L8 3. https://github.com/Abe404/root_painter/blob/2825a12f1499b8f3c6f84438a90f7d22529c5f81/painter/src/build/DEBIAN_control#L2 4. https://github.com/Abe404/root_painter/blob/b605511eb4cfba44adfbfe5f43ccb77688b4fa2c/painter/src/build/settings/base.json#L6 5. When I actually create the release+tag it is specified manually How can I specify...