Xiaolong Cao

I was running code like below to remove sequences that is a part of a longer ones. ``` cd-hit -i seq -o seqout -c 1.0 -n 5 -M 25000 -T...

cannot get accurate protein sequences from the gff file

3

I tried to extracted the cds sequences from the gff file. ```bash gffread -g chm13.draft_v1.1.fasta -x cds.fa chm13.draft_v1.1.gene_annotation.v4.gff3 ``` however, when trying to translate the cds to proteins, the open...

discusssion about searching dark proteins by re-using previous searching results or store internal files

3

Hi, Michael. I starred sage but haven't realized that it is such a good innovation. I got suggestions from Jimmy. Here is our disscussion https://github.com/UWPR/Comet/issues/75 I also want to seek...