truvari

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merging different SV type?

2

**Version** : Truvari v4.2.2-dev 1cd03b2f4e8afdb3431595fa351501b36db3cfd8 **Describe the bug** : I'm trying to use Truvari merging to merge a file containing sv calling coming from 4 different callers. Actually I did...

leone93

GT integrate

1

Hi: I want to ask this: **before:** chr1 744867 . g GTATATATATATATATA . . . GT ./. 1/. chr1 744867 . g GTATATATATATATATATA . . . GT 1/. ./. `truvari...

Hanjunmin

bench SVs without sequences

2

Hi, I am wondering how the size (--pctsize 0.3) of SVs are calculated when SVs lack sequences, e.g., the ALT column is in a VCF file. Best regards,

WeiYang-BAI

Disparity between bench, phab and ga4gh query vcfs?

1

A variant shows up in the original fp.vcf.gz, and shows up in phab.output.vcf.gz, but **does not show up in phab_bench/tp-comp.vcf.gz or phab_bench/fp.vcf.gz**. **This variant then does not show up at...

drkthomp