Afif Elghraoui

Results 15 issues of Afif Elghraoui

I've hit what's probably a rare corner case. Circularization completed successfully, but the start position of the chromosome was not set properly. I checked the logs for fixstart and this...

Hopefully addresses recurring issues that I and others have encountered (#10, #525) with taking an unnecessarily long time to find this information. I expected it to be mentioned here, but...

Hi, all I want to get this added to bioconda, but it looks to me from the commit log that several bugs were fixed since the last release in 2017....

On https://conda.io/docs/user-guide/tasks/build-packages/define-metadata.html#source-files It currently says: > Test files that are copied from the source work directory into the temporary test directory and are needed during testing. But it would be...

type::documentation
stale

This allows for passing additional compiler/linker flags from the command line by supporting standard variables like CPPFLAGS, CFLAGS, and LDFLAGS. It also saves a good amount of redundant typing. This...

In the Debian package, we use the standard variables for setting compiler/linker flags for hardening and other purposes. Aside from removing much redundancy from your Makefile, this patch makes it...

We're watching the release tags so we know when to update the software on our cluster, but the latest tagged release was in 2017 and it looks like there was...

I'm trying to infer a tree using concatenated SNPs and consistently get this core dump when multithreading. I do not have this problem with the original `raxmlHPC`, but it does...

I was interested in how the LCBs called by SibeliaZ change as I include more genomes, so to start, I ran it with two ~4.5Mb genomes that differed only by...

I remember seeing this explained in discussions of issues reported here. It is something about looking in `mypwatcher/jobs/*/std{out,err}`, but it would helpful to have this in the documentation somewhere. A...