prokka
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Link `--proteins` section of manual to `fasta-db-format` section
Hopefully addresses recurring issues that I and others have encountered (#10, #525) with taking an unnecessarily long time to find this information. I expected it to be mentioned here, but was confused not to find it mentioned or linked, so started searching GitHub issues afterwards.
Thanks for your consideration and for Prokka overall!
you can verify the proper github link gets created from the rendering on my fork: https://github.com/0xaf1f/prokka/tree/doclinks#option---proteins