binding-sites topic

P2Rank: Protein-ligand binding site prediction tool based on machine learning. Stand-alone command line program / Java library for predicting ligand binding pockets from protein structure.

rdk

Prediction of binding residues for metal ions, nucleic acids, and small molecules.

Rostlab

Library for prediction of cryptic binding sites

salilab

Pytorch implementation of BionoiNet, which is a deep learning-based software to classify ligand-binding sites.

CSBG-LSU

A python toolkit for analysing membrane protein-lipid interactions.

wlsong