molecular-modeling topic

List molecular-modeling repositories

PyEMMA

304
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118
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🚂 Python API for Emma's Markov Model Algorithms 🚂

gnina

561
Stars
140
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A deep learning framework for molecular docking

ReLeaSE

342
Stars
132
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Deep Reinforcement Learning for de-novo Drug Design

stk

239
Stars
45
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A Python library which allows construction and manipulation of complex molecules, as well as automatic molecular design and the creation of molecular databases.

MolecularGraph.jl

187
Stars
27
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Graph-based molecule modeling toolkit for cheminformatics

moleculekit

192
Stars
36
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MoleculeKit: Your favorite molecule manipulation kit

3Dmol.js

765
Stars
191
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WebGL accelerated JavaScript molecular graphics library

r3dmol

88
Stars
4
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🧬 An R package for visualizing molecular data in 3D

Fermi.jl

130
Stars
23
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Fermi quantum chemistry program

Clapeyron.jl

198
Stars
51
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Clapeyron provides a framework for the development and use of fluid-thermodynamic models, including SAFT, cubic, activity, multi-parameter, and COSMO-SAC.