spatialdata-plot

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timtreis

When trying to render labels using e.g. `color="red"`, the code fails for me: e.g. `blobs.pl.render_labels("blobs_labels", color="red").pl.show()` gives Not sure if this is intended, but I think our documentation is a...

Sonja-Stockhaus

Hi @timtreis, I never had access to code auto-completion using `spatialdata-plot`. I guess it's not specific to me, but likely related to the way `_register_accessor` is used, correct? I guess...

quentinblampey

In `render_shapes()`, the docstring says for the `shape` parameter: `Value to scale circles, if present`. However, when using matplotlib, the scaling also works for (multi)polygons (without adapting the extent of...

Sonja-Stockhaus

Logger should mention from which function it's triggered

1

Since we're chaining calls, these events can come out of any of these functions. I think the logger should mention the function? Wdyt @Sonja-Stockhaus ?

timtreis

Coloring by AnnData in `render_labels` is insanely slow

1

When I call ``` fig, ax = plt.subplots(ncols=1, nrows=1, figsize=(4, 4)) ( sdata_sample2 .pl.render_labels( "filtered_hexes", # color="B_cells", table_name="morphology_filtered", ) .pl.show(ax=ax) ) ``` the plot takes about 15 s, when I...

timtreis