webknossos-libs

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The subprocesses often (always?) survive the ctrl+c signal, which makes it cumbersome to kill the entire wkcuber instance.

philippotto

normanrz

https://samples.scif.io/images/dnasample1.zip is not available anymore. I disabled the dm3 tests for now.

philippotto

Fix permission/ownership of created data when using docker

1

When using docker to run the cuber, the created data directories and files are root-owned, which is not ideal and creates problems when further processing the data or importing it...

daniel-wer

### Description: - This PR adapts the BufferedSliceWriter, to allow resetting the offsets after initialization. ### Issues: - fixes #968 ### Todos: Make sure to delete unnecessary points or to...

markbader

### Description: - To avoid the behavior of the default PIMs tiff reader, this PR adds a tiff reader based on the tifffile library. While the default tiff reader always...

markbader

Bumps [distributed](https://github.com/dask/distributed) from 2023.12.1 to 2024.4.2. Commits 32de245 bump version to 2024.4.2 d27a3c4 collect memray profiles on exception (#8625) f621c65 Ensure inproc properly emulates serialization protocol (#8622) 3f13a2d Relax test...

dependabot[bot]

Bumps [ruff](https://github.com/astral-sh/ruff) from 0.4.0 to 0.4.1. Release notes Sourced from ruff's releases. v0.4.1 Changes Preview features [pylint] Implement invalid-hash-returned (PLE0309) (#10961) [pylint] Implement invalid-index-returned (PLE0305) (#10962) Bug fixes [pylint] Allow...

dependabot[bot]

Bumps [pillow](https://github.com/python-pillow/Pillow) from 10.0.1 to 10.3.0. Release notes Sourced from pillow's releases. 10.3.0 https://pillow.readthedocs.io/en/stable/releasenotes/10.3.0.html Changes CVE-2024-28219: Use strncpy to avoid buffer overflow #7928 [@​hugovk] Use functools.lru_cache for hopper() #7912 [@​hugovk]...

dependabot[bot]

Bumps [idna](https://github.com/kjd/idna) from 3.4 to 3.7. Release notes Sourced from idna's releases. v3.7 What's Changed Fix issue where specially crafted inputs to encode() could take exceptionally long amount of time...

dependabot[bot]