Maxime U Garcia

icon indicating a website link https://maxulysse.github.io/ icon indicating an email [email protected]

icon company @seqeralabs icon location Stockholm icon location Bioinfomagician designing pipelines @seqeralabs | @nf-core

Results 406 comments of Maxime U Garcia

Speed up pytest with parallelization

Do we want to work on that if we're going towards nf-test?

Speed up pytest with parallelization

:homer:

add nft-utils and links to github actions

I feel you should be the one to merge, since you did all the work. Preview looks amazing.

Clarify infer strandedness from current subsampling + infer step

done in #1307

Clarify infer strandedness from current subsampling + infer step

yeah, I saw the comment and modified my PR in accordance, and then said I've done it

Conda versus container produce different versions.yml

@Krannich479 I'd recommend trying the [nft-utils](https://nf-co.re/nft-utils) plugins, I added a sort to the functions that check the versions.yml -> removeNextflowVersion -> removeFromYamlMap

[FEATURE] Split DeepVariant process

I really like what you did. I'd say it's time for really thinking properly on how to do this nicely and propagate it trough the pipelines that need it. I'll...

Identified a WES ASCAT Error and updated documentation

Can you update the CHANGELOG.md file?

Identified a WES ASCAT Error and updated documentation

@nf-core-bot fix linting pretty please :pray:

fix: nf-test in strelka

> @maxulysse Any ideas on this? what was the error?