Kyle Moad

Results 43 comments of Kyle Moad

I'll second p91paul. I've been very happy with the icons in the center and large. I've tried Gnome 40 throughout development and the smaller bottom icons take me just a...

Getting the same issue on Fedora 34 system install. Downgrading with `dnf install cmake-3.19.7-1.fc34` resolved it, but it would be nice to be able to use latest cmake.

Issue is being worked on #27

Hi tenzinhl. Thanks for the detailed digging here. I agree with letting exceptions bubble up from `get_file_to_string`, and handling them at a higher level. Catching everything into a `return ""`...

The PR. Along with commits 36e514b6a48ca080e28ebb7e7df6febbb2523378 and d711d154bb0f7632399c3648ad627067b7786ffd should fix this issue. They also improve oc's handling for fatal exceptions.

Could you send the output of `oc config cravat` and `oc config system`. Also, the log files for the job. They should be something like `INPUTFILENAME.log`. Also, you could try...

Python 3.6 is not supported now, so updating makes sense. Looks like `sqlite3.connect` in python3.7 will accept path-like objects. So changing required python to that would work. https://docs.python.org/3.7/library/sqlite3.html#sqlite3.connect However, python3.7...

Hi bogdanovvp. Thanks a lot for the digging here, and the PR. Unfortunately, the changes won't work for some jobs. For variants found in more than one sample, those columns...

Looks like this issue is in PyVCF at https://github.com/jamescasbon/PyVCF/issues/334, but the project isn't maintained. So PyVCF has been forked into https://github.com/dridk/PyVCF3, now called pyvcf3, . There are a few other...