Mark Keller

Results 354 issues of Mark Keller

**User story** Avoid the need to set up a higlass server or rely on an existing one. **Preferred solution** - Investigation: Are there currently any “serverless” data fetchers for the...

feature
investigation
cell-atlas
epigenomics

**User story** **Preferred solution** **Possible alternatives**

feature
cell-atlas
epigenomics

**User story** Possibility that the segmentation mask OME-TIFF channel names do not correspond do the types of observations represented (e.g. obsTypesFromChannelNames: false ) and we need a way to tell...

feature
cell-atlas

**Describe the bug** https://github.com/vitessce/vitessce/blob/f4900f79f5fc2c1bdcc0ee42e1ba4b7026ab939a/packages/view-types/layer-controller-beta/src/ImageChannelController.js#L62C5-L62C13 Possible solutions: - use file URL and file options in key - clear out query cache based on config.uid? Might be too agressive if config.uid is...

bug

**User story** Rather than separate notions of selected entities and filtered entities, we should derive filtering from selections for less confusion. **Preferred solution** - Add a coordination type for setting...

feature
ux

**User story** Create examples which visualize the results from the spatial-query method. **Preferred solution** **Possible alternatives**

demo
possibly-outdated

**User story** **Preferred solution** **Possible alternatives**

feature

**User story** **Preferred solution** **Possible alternatives**

feature
investigation
new file type

**User story** Once we have (tabular) data in memory, we can in theory allow users to download a CSV (or JSON,etc) file based on that data, regardless of the format...

feature
investigation

**User story** **Preferred solution** **Possible alternatives**

feature
new file type
scmd