ClusterGVis

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Error in ht.col.list[["col_range"]] : subscript out of bounds

2

When I try to use the built-in data to run, I encounter the following error. How can I resolve this? cm visCluster(object = cm, + plot.type = "heatmap", + column_names_rot...

pandaqiuqiu

图片拼接错位

3

library(ClusterGVis) df

YuanMei2

could not install ClusterGVis

4

Hi, I tried to install and got the following error. Can you please help me check? Thanks. Haiyan lei > library(devtools) > devtools::install_github("junjunlab/ClusterGVis") Downloading GitHub repo junjunlab/ClusterGVis@HEAD Error in utils::download.file(url,...

HYan-lei

The package is pretty cool. Thanks to Junjun. But T got an error when plotting heatmap with results from monocle2. Here is the message: > df = plot_genes_branched_heatmap2(cds[c(indGene), ], branch_point...

cystone

俊俊大佬，请问如何提取每个cluster分类对应的细胞呢？

2

使用plot_genes_branched_heatmap2函数，如参数设置num_clusters = 3，我想提取这些聚类对应的细胞，添加到单细胞项目metadata，类似seurat_cluster这样，每个细胞对应哪个聚类能做到吗？非常感谢！

HHRlegend

您好，请问这个错误如何解决呢？

4

# [1] 以细胞群的均值作为输入,且默认对基因进行去重 > st.data1

suyy1

clusterData Error

3

Hi Junjun, Thank you so much for this tool! It's quite helpful for me. I came across with this error when using a large matrix. I guess this issue may...

wuxujia-dev

非模式生物用Eggnog自构注释文件使用enrichCluster报错

4

您好，非常感谢作者的软件。 我使用broccoli的蛋白序列在Eggnog自构注释文件，然后使用AnnotationForge构建Org.My.eg.db。 >AnnotationForge::makeOrgPackage(gene_info=gene_info, go=gene2go, maintainer='ZWJ', author='ZWJ', outputDir = "./", tax_id = 0000, genus = 'M', species = 'y', goTable = 'go', version = '1.0') 但用此使用enrichCluster一直出现报错： >enrich rlang::last_trace() Error in `map()`:...

zwj2022

KEGG富集问题

10

我用您包里的实例数据集Exp做KEGG  这个代码跑KEGG富集的时候会出现  这个问题，不知道如何解决 用我自己的数据就会这样  麻烦您解答一下，谢谢

BigCleverZ

各位大佬好，请问enrichCluster中kegg方法报错，但其他均可正常运行，我用help中的例子数据测试后kegg依然报错该怎么解决？ 

yzh-12138