tomviz

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Custom transformation - need to reshape array to (M, N, 1) to avoid problem

1

**Describe the bug** Attempted to use custom transformation, using an outside library. I see that the VTKnumpy array received is a (M, N, 1) for a (M, N) array. Most...

aaron4444

Orbit Camera default missing

10

I am trying to make a basic animation in tomviz where the object rotates about it's center. It appears that datasets other than the sample dataset, or a dataset that...

Hovden

Implement a checkbox to the right of "projection no" so that when it is checked the sum of all projections is displayed instead of one specific particular from the tiltseries....

Hovden

Add Nature Communications citation to welcome window

5

Please provide an overview of what this pull request does, and reference any relevant issues that are addressed. Once submitted you are encouraged to seek review of the code, and...

jtschwar

Add real time tomography user manual to help documents Please provide an overview of what this pull request does, and reference any relevant issues that are addressed. Once submitted you...

jtschwar

**Describe the bug** When launching Tomviz I get a Messages window showing an error log related to importing certain Python libraries (see error log attached). This leads to not being...

GeriTopore

Binning tilt images does not change pixel size

1

**Describe the bug** When you use the binning function called "Bin tilt images x2" and "Bin Volume x2" the data dimensions are changed incorrectly. The full size of the data...

ercius

**Describe the bug** Tomviz 2.0RC4 utilizes FFMPEG (by default) to export movies. The codec selected by default (and is unchangeable) outputs the movie as (from ffprobe): Video: mjpeg (Baseline) (MJPG...

ercius

**Describe the bug** The color transfer function graph display at the top of the window doesn't render properly and the garbled display makes it unusable. **To Reproduce** Steps to reproduce...

jmarquisbq

Bumps [requests](https://github.com/psf/requests) from 2.20.0 to 2.31.0. Release notes Sourced from requests's releases. v2.31.0 2.31.0 (2023-05-22) Security Versions of Requests between v2.3.0 and v2.30.0 are vulnerable to potential forwarding of Proxy-Authorization...

dependabot[bot]