tomviz

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Allow non-active scalars to be modified in python operators

6

This primarily adds a new function, `dataset.set_scalars()`, which allows the user to modify non-active scalars in the python operators. Additionally, the user can add new scalars with `dataset.set_scalars()`. If there...

psavery

Manual tilt series with 2kx2k images

3

**Describe the bug** The manual tilt series GUI shows the current projection image as white if the tilt series is as large as 2048x2048. **To Reproduce** Steps to reproduce the...

ercius

**Describe the bug** A clear and concise description of what the bug is. The 2D slice tool appears to fail to update after cropping the volume along any axis. **To...

jtschwar

The Tomviz interface is far too quiet, we should work to provide timely updates in the status bar, and probably in the application log. Especially for large data sets it...

cryos

If you have a data source with dark and white data, and you run an operator on it in the internal pipeline, the dark/white data are lost in the process,...

psavery

Show Dark/White Data doesn't work for large files

1

For larger files (> 5 GB in my testing, but maybe even less than that), the dark and white data appear as blank images. However, it does look like they...

psavery

Add support for running manual image alignment in external pipelines

1

cjh1

**Is your feature request related to a problem? Please describe.** The full field of view does not always need to be reconstructed. It is possible to crop along the tilt-axis...

ercius

Our extended EMD format currently supports multiple scalars, which is very nice. But it does not support saving bright and dark data. This might be useful to have. We should...

psavery

Add support for running Crop operator in external pipelines

1

cjh1