daylily
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Daylily-Informatics
A NGS analysis framework for WGS data, which automates the entire process of spinning up AWS EC2 spot instances and processing FASTQ to snvVCF in <60m, for dollars a sample and achieving Fscores of 0....
for hosting a light webserver for analysis results.
To simplify the compute/head node configuration when a new cluster is created.
For `bin/daylily`, changes to make: - Allow specification of a file to read the user prompted variables in from and skip the terminal interactive flow. - Change the creation of...
Now that the repo version is pinned consistently, lock down all conda env definitions.
Add mysql setup to the post-install-script (headnode only), connect to this and use it! Will enable things like limiting inflight jobs to a specific max combined threads/vcpu count.
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A NGS analysis framework for WGS data, which automates the entire process of spinning up AWS EC2 spot instances and processing FASTQ to snvVCF in <60m, for dollars a sample and achieving Fscores of 0....