Marco van Zwetselaar

Results 10 issues of Marco van Zwetselaar

Scanning a file with fewer than 100 reads yields a `StopIteration` exception, due to an exhausted iterator in `next(all_lines)`.

This closes issue #26 which was introduced by commit ecf589d.

With `--bypass-trim` a failure occurs in `utilities.fastq_to_fasta()`, due to generation of an invalid fasta file name in `run.tandem()`. The offending statement is: input_fastq.replace(os.path.splitext(input_fastq)[-1],config.fasta_file_extension) When `input_fastq` has no extension (as is...

Very minor fix, but the bug got me on a wild goose chase when KneadData said it couldn't write to a perfectly writeable file. Turns out it reported the wrong...

A form key set in the properties of a start event or user task in the Eclipse modeler does not trigger the form to be presented. Inversely, a form key...

Verifying the 3.10.0 deb gives: $ gpg --verify protonmail-bridge_3.10.0-1_amd64.deb.sig gpg: assuming signed data in 'protonmail-bridge_3.10.0-1_amd64.deb' gpg: Signature made Wed 06 Mar 2024 13:59:07 EAT gpg: using RSA key D51E64D3E63EDC3EEF7864CEE2C75D68E6234B07 gpg:...

## Expected Behavior With "non-protonbridged" IMAP accounts, when I perform "detach attachment" in Thunderbird (which stores the attachment locally and removes it from the message, replacing it with a link...

bug

Right after installing a 2.0.5 instance, when the server has no internet connection, it is impossible to login. Meanwhile, the log is spammed with stack traces: ``` 16-Mar-2020 15:53:19.060 WARNING...

help wanted

These four jar files are broken in the repository: - `libs/gwt-google-maps-v3-1.0.1.jar` - `libs/gwt-visualization-1.1.2.jar` - `libs/odk-httpclient-gae-4.5.2-1.jar` - `libs/odk-tomcatutil-1.0.1.jar` Running `jar tf` on any of these gives: $ jar tf libs/gwt-google-maps-v3-1.0.1.jar java.util.zip.ZipException:...

needs discussion

My apologies if this is not the correct place to report this, but I would expect the issue to show up in this project too. I am running `blastn` in...