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LTR insertion time

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Hi Shujun ! Thinks for you biosoft LTR_retriever, but now I 'am enconter some problem that what means "-0" of Insertion_Time in .pass.list files?

Hi~ TEsorter can be worked in animal genoem ?

2

Hi~ TEsorter can be worked in animal genome ?

How should I extract the gene ID of expansion and contraction?

1

Dear author, but my result is the result of CAFE4, how should I extract the gene ID of expansion and contraction?

Error: no valid ID found for GFF record

2

Hello, I don't know what went wrong, could you tell me? thank you

low BUSCO scores

1

Dear author, I got the assembly after running the software, but the estimated genome integrity is very low, C:54.2%[S:42.5%,D:11.7%],F:2.0%,M:43.8%,n:1013,E:4.0%, I am not sure what went wrong. I attach the running...

How do you assemble chromosomes X and Y?

3

Dear author, how can you assemble X and Y chromosomes? What parameters and data need to be added