Zachary Munro
Zachary Munro
Trying to recreate some previous;y computed results and there are a few places where nondeterminism could be present and I was wondering if it could be present in this script.
The `normalize-by-median.py` script (under /scripts) would be very useful as a module. I want to be able to do something like: ``` import khmer khmer.normalize_by_median(input=fastqgz_filepath, output=output_fastqgz) ``` Is something like...
Is there support for Python3.7+? I am trying to install ariba into my conda environment following the guide on [this page](https://anaconda.org/bioconda/ariba). I tried using the first command there which is...
I have been trying for days to get pyopenms installed on my mac and I believe the issue is the M1 chip that my laptop has. When I try to...
This produces some useful statistics, and I am wondering I can use it to find the kmers the true kmers of a sequence.
Wrote this script the other day that I thought would be helpful for people. It generates a file similar to the output of kraken1's `kraken-translate` command using an classification output...
What Cuda version is needed to run Racon in GPU mode? I am running with Cuda v11.1.105 and it is not working. The readme says Cuda 9.0+. When I run...
These are the commands I ran: `python3.7 -m pip install pylint_runner` `pylint_runner -v` output: `zsh: command not found: pylint_runner` OS: Ubuntu 16.04
I have tried running installation with python3.6, 3.7, and 3.8 and I get a similar error message with each: ``` $ python3.6 -m pip install pymummer Collecting pymummer Cache entry...
### Discussed in https://github.com/mlflow/mlflow/discussions/6293 Originally posted by **PeterPirog** July 21, 2022 How to permanently delete the experiment? I get an error if I try create again experiment with the same...