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problems with plot_cpdb using cellphonedb v5 outputs

1

Hello, here are some updates with cellphoneDB v5 outputs. The "means" and "pvals" file have been changed.  Because the column 'interacting_pair' is missing in the dataset, many functions in...

Zifeng-L

proble Please check your options for splitby_key and your celltypes.

11

I encountered the following issue while using plotcb.   I've tried changing many things, but I'm still getting the same error.

dd123456000

Problems plotting interactions with multiple words in cpdb4

2

Hi, Thank you for this very helpful package - I'm having a lot of fun plotting my data! However, I'm having trouble plotting specific interactions which include multiple words (such...

jweefergs

plot_cpdb() error

4

Hi, Many thanks for the amazing tool. I'm using ktplots and cellphoneDB for the first time. I've used cpdb_statistical_analysis_method from latest cellphoneDB v5 to run statistical analysis. plot_cpdb_heatmap() works fine...

rosanababu