Zhitao Guo

@effigies Hi Chris, I hope you're doing well, and I'm sorry to bother you. I’m encountering a puzzling issue with the output of fMRIPrep. I used fMRIPrep 24.1.1 and 24.0.1...

Thank you. Just to confirm, the latest version of fMRIPrep (24.1.1) does output native fsLR 32k mesh files (`sub-_hemi-[LR]_space-fsLR_den-32k*.surf.nii`) in `anat` folder, right? I want to double-check that my docker...

It doesn't matter. I'll try to generate other files I need using other methods, such as scripts from the HCP Pipelines. Looking forward to the release of the new version.

> Single-band references will not be used in motion correction, since the contrast may differ strongly from the multiband BOLD. The single-band references are used for coregistration with other images...

> Yes. See https://neurostars.org/t/mcflirt-related-behavour-fmriprep-strange-motion-estimations-in-confounds-timeseries-tsv-lots-of-zeros/18037 for an investigation that led to this divergence. Thanks again~ > The subcortical data is resampled to MNI152NLin6Asym, and the cortical data is sampled to the...

Thank you very much for your reply and my confusion was addressed! Just out of curiosity and various future applications, is it possible to specify the source space for cortical...

I'm sorry for the ambiguous description. What I mean is that specifying the generation of cortical and subcortical data in .dtseries.nii files. For example, cortical data could be derived from...