Zhihao Zheng

swc export error

5

``` segid = 720575940621647595 mm = trimesh_io.MeshMeta() mesh = mm.mesh(filename = "{}.obj".format(segid)) sk=skeletonize.skeletonize_mesh(mesh, invalidation_d=12000) sk.export_to_swc("{}.swc".format(segid)) ``` .obj file is [here](https://drive.google.com/file/d/1jM0sz_J_X8-6OhapHC1eBTM2pvzBevL0/view?usp=sharing) ``` In [16]: sk.export_to_swc("{}.swc".format(segid)) --------------------------------------------------------------------------- ValueError Traceback (most recent call...

NeuriteBlast fails for FAFB neurons

1

Use appropriate credentials for FAFB login ``` library(catmaid) source("../catmaid_fafb_login.R") test_skids = c(21999,22132) test_n=read.neurons.catmaid(test_skids, conn=conn) r = NeuriteBlast(test_n[[1]], test_n[[2]]) ``` The above script returns the following error: > Error in findDirectionVectorsFromParents(target,...