zhangyehao
zhangyehao
like: - !Hist graph: ../simple_files/simple_graphs/t_groups.gfa - !Hist name: testing this count_type: Bp graph: ../simple_files/simple_graphs/t_group2.gfa display: false is: - !Hist name: command-hist count_type: Bp graph: ../panthera23.chroms/chr19.gfa display: true [zhangyehao@login ~]$ panacus...
I have removed these two Hist blocks. My .yaml file looks like this: ``` - !Hist name: command-hist count_type: Bp graph: /panthera23.chroms/chr19.gfa display: true ``` I don't know what the...
Yes, I know that.
[test.log](https://github.com/user-attachments/files/18827389/test.log)
My pleasure
Thank you for releasing panacus v0.3.1. I am now able to use panacus report to generate HTML reports. However, it seems that there is an issue with the results. **In...
@leone93 I’m encountering the same issue. I’ve adjusted the --fragment-mean and --fragment-stdev parameters based on the first 50,000 reads, but the problem still remains. Could you suggest a better approach?
@leone93 My --fragment-mean and --fragment-stdev parameters are determined based on the first 50,000 paired reads. Some samples work fine, but there are still some that don’t. For example, for one...