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Interop with MATLAB COBRA toolbox

1

This should include: - [ ] Interop with COBRA toolbox map txt file - [ ] Generating Escher maps, Escher-compatible datasets, and JSON models directly from COBRA toolbox If any...

zakandrewking

Currently, `null` values evaluate as 0. However, when negative values are allowed for genes, then 0 means significant expression. This is mainly important for applications like expression arrays. For RNA-seq,...

zakandrewking

Possible to split metabolite nodes?

1

Let's say I have two reactions connected with each other e.g. `A B C` Is there a way to split those again into two separate reactions `A B` and `B...

willigott

Edit reaction ids in map

1

It would be very nice if it was possible to change the bigg_ids directly in the map. The reason for this is that I reuse old maps to draw one...

sulheim

Feature Request: option to change zoom level in 'zoom_to_element' property

3

Hello @zakandrewking , Just wanted to know if there is any way to change the zoom level in 'zoom_to_element' property. While, zooming to a node, I want to customise zoom...

yugi03

In the corner, as seen on Google Maps and many other tools. 

zakandrewking

In search results, the escher homepage doesn't have a description

zakandrewking

Highly requested feature

zakandrewking

At least programmatic access in the reaction_scale, etc. - [ ] color arrows in both directions

zakandrewking

option to interpret no data as a zero value, or possibly an arbitrary user-selected value 

zakandrewking