yuntianf

Thanks! But I do have a very large sparse distance matrix, and I don't want to store it as a `dist` object, but build a `frNN` object from scratch instead....

No I didn't use any package, I just store the sparse distance as a long table, each row representing the distance between 2 nodes, if `dsCMatrix` could work for `frNN`,...

Hi, I found that even I feed `frNN()` with a `dsCMatrix`, that function will transform it to normal matrix ``` if (!.matrixlike(x)) stop("x needs to be a matrix to calculate...

But this fastq file couldn't be viewed by `less`, it's a biniary file. And it couldn't be aligned with `minimap2` either, here is the error log: ``` Input parameters: gene...

Hi Luyi, I don't think it should be the problem of `\\`, which is equivalent as `\` in linux path. Here is a verification: ``` Input parameters: gene annotation: /home/reference/annotation/human/gencode.v39.annotation.gff3...