Yifei Men

@dasmoth Thanks for highlighting the issue. I think both of the solutions you propose are very reasonable. I'm happy to change the code and disable the translation for the transcripts...

@dasmoth I was experimenting with this using a mapping chainset, and wanted to check with you what's the expected behavior for mapping with strand flip. Here's a hypothetical illustration... Suppose...

No, I'm the one missing on stuff here :( I should have tested this more thoroughly, I apologize for that, and thanks for taking the time to reply. > The...

@dasmoth We also briefly discussed this issue on the Dalliance Google group. https://groups.google.com/forum/#!topic/biodalliance-dev/6yBxQBUO2TA I have not revisited the problem with greater details, but if you have any tips or suggestions...

Thanks Thomas for the outline, that's very helpful. I would not be able to get to this until a bit later, but will definitely hope to make this happen in...