yhli1992
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yhli1992
Time cost is also too high, which only finished 90/82786 after 2 hours with -pa 5 and -qq
Is that loaded the whole Dfam file (~66.7G) to RAM for each core and mapping to all species sequence?
@rmhubley Thanks for your reply. According to my test, it seems to be caused by defaultly extended 2k sequence. The usage of RAM reached to 80G in analyzing fasta file...