Yen-Yi Lin

We need to add a two-pass mode in scanning sam/bam file and store all mapping records with supple mapping in memory to supply the information for hard-clipping reads in the...

Some FNs locate in messy region which consists of more than 10k anchors, and incorrect splitting cause problems for building correct contig. We need to check if there is a...

Add a function to do one-pass set cover if integration into streaming takes time to finish,

We need to evaluate the partition file generated by commit 43cdb49 and 30639c0 with -z. The differ in dealing with locating mappings with extremely long template length. 303639c0 would assign...