Yee Mey

Hi, I opened a PR for this, addressing all the suggested changes except one re: True/False booleans in ep. 05. This appears in the challenges section, and instructors sometimes skip...

(I'm not a developer on this project.) Based on this: > Activating conda environment: /BiO/tutorial/pipeline-structural-variation-1.4.0/results/.snakemake/conda/0ebb204c /bin/bash: bcftools: command not found It looks like bcftools is either not installed, or not...

I noticed that the rank codes are missing from a few lines in your report, e.g. the Eukaryota, Archaea, Viruses lines, but are present in others, e.g. "G" for Azorhizobium...

I just ran into the same issue of missing rank codes with Kraken version 2.1.2, and both k2_pluspf_20220908 and k2_pluspf_20230605 db. In my kraken reports, "D" is missing, but subdomain...

@lab-rat-kid, the [README](https://github.com/rrwick/Porechop/blob/master/README.md) recommends GCC 4.9.1 or later. [You might want to try GCC 5](https://github.com/bioconda/bioconda-recipes/pull/11399#issuecomment-431238857). From the [README](https://github.com/rrwick/Porechop/blob/master/README.md) notes: > If you'd like to specify which compiler to use, set...