Yaroslav Halchenko
Yaroslav Halchenko
See individual commits. Now (original version) would show ``` $> reproman --dbg jobs -s [status: N/A - needs datalad] 20200107-213600-f814 on smaug via condor$ '{inputs}' '{outputs}' participant --participan... ... ```...
```shell (reproman-dev) login2.ls5(33)$ reproman create -t shell local 2020-10-09 14:54:34,583 [INFO ] Created the environment local (reproman-dev) login2.ls5(34)$ reproman run --follow -r local --sub slurm --orc datalad-no-remote python -m nose...
I am trying to use BIDSonym, but unfortunately due to https://github.com/PeerHerholz/BIDSonym/issues/28 I am doomed to provide "$PWD". With datalad run, since I guess we do magical decision making on either...
It would be a typical use case that users might have already `~/.aws/credentials` which is a typical python config file with possibly multiple sections containing credentials. If user decides to...
I did ``` reproman retrace `which datalad` ``` where datalad was installed via `pip install -e` so I got ``` - name: datalad version: 0.12.0rc6 local: true location: /home/yoh/proj/datalad/datalad-master editable:...
How should we instruct people to rerun datalad run annotated analyses using their remote resources? The only way now is to reproman login to the remote resource, get the dataset,...
ATM it is just e.g. ``` [ReproMan] save results for 20200528-132025-3183 ``` I have got spoiled by `datalad run` to provide me commit messages which provide immediate information about what...
Information was posted to https://github.com/dbic/handbook/blob/master/src/discovery.md#password-less-authentication-for-ssh . Would be nice to test it working with reproman/datalad tandem, and tune up anything needed to be tuned up for scheduling tasks on their...
TODOs: - [ ] travis supports OSX (https://docs.travis-ci.com/user/reference/osx/) - [ ] tests should pass or be properly skipped on OSX - ATM seems to be lacking dependencies defined
There exist multiple ways on how to establish a "reproducible" environment. It might be worth documenting them somewhere (e.g., in reproman docs) Python only - `pip freeze`/`pip install` - so...