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check building Albany with branch apf_sim_config

please see this commit: https://github.com/SCOREC/core/commit/35a0538d5e117fcdffae66729a63a327822195b6 It added Simmetrix advanced meshing flag. So we can get things running in case we have Simmetrix but don't have Simmetrix advanced meshing library.

document the Chef Input class variables

we have a conflict document here: https://github.com/SCOREC/core/blob/develop/phasta/phInput.h#L119-L120 Please take a look at this. I think "simmetrixMesh" is not related to simplex mesh measure.

adaptation fails due to transferParametric's default value?

https://github.com/SCOREC/core/commit/20d360ff472b338206671ba0b55840e0f4fadd66 please let me know if this commit fixes that.