Yan Gao
Yan Gao
Thanks for your reply! > 1. from the `filtered_feature_bc_matrix` folder then it does not assume the file contains header I did notice this difference in the source code. I was...
"-f 2" should give you the tabular output, not fasta output. Can you paste some of the output results you have here?
Actually, the output you show here is the **expected** format for "-f 2".
The other information are omitted because you specified "-u", which only output the repeat unit sequence.
It sounds weird to me. Can you paste/upload your full command and part of your data here so that I can look into it?
Hi, you mentioned that "TideHunter allowed me to set the minimum copy number (-c) to 1 without crashing", however TideHunter was not meant to output any consensus sequence with less...
Thanks @cjw85 , I can reproduce it now. Also I see this error when I use my system python: `/usr/bin/python3 -m pip install pyabpoa`. Usually I use conda python/pip and...
This error might be related to the python package building process. Although I have no clue to fix it right now. Here is my new finding: In the docker environment,...
@subwaystation , you mean segfaults with SSE4.1 but not AVX2? Can you also share the data that causes the segfault?
Hi @glennhickey @subwaystation , Latest commit: 5219dc32c1a1540614937f466fddd572ae646cf2 Sorry that it takes so long to reply, but I finally fixed this bug, which is caused by an overflow when the graph/alignment...