xzhouaw

Thanks for your fast reply. Here is the result: ``` > head(rownames(X)) [1] "X20210128.RNA.Cov1" "X20210128.RNA.Cov2" "X20210128.RNA.Cov3" [4] "X20210128.RNA.Ctrl1" "X20210128.RNA.Ctrl2" "X20210128.RNA.Ctrl3" > head(colnames(X)) [1] "A1BG" "A1BG.AS1" "A1CF" "A2M" "A2M.AS1" "A2ML1" >...

Thanks! I used the following code to convert them to matrix and then the problem disappeared. ``` ref.dat

I am facing the same problem. Could I know whether it is updated or there is a parameter I can use to solve it in my code?