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                                            xuxiaoman0212

object of type 'int' has no len() in Scaffolds.py _remove_weakest len(path)

I got the same error. `INFO:Scaffolds:Entering join_paths_max_span_tree /public1/home/ruifeng/anaconda3/envs/hicexplorer/lib/python3.6/site-packages/scipy/sparse/compressed.py:742: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient. SparseEfficiencyWarning) INFO:Scaffolds:320 hubs were found WARNING:Scaffolds: Hub-hub contact...

AssertionError

I got the same error. Hi fidel, how can I fix it? @fidelram Thanks for your help.

misassembly correction

Hi yongyi, I got the same error, how did you solve it? @yongyiyu Thanks a lot!